YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|22297067, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTEQEVTYTT VRFHKSSVFQ NEVRSEETQS AKEIGHRESS VPWKLIVIAL GILCSVLLVT  60
   61 VAVLVTNCLQ YNHETHELQE TQNSQHNCST MENDIKLKEE MLRNMSVEST RYNALLDLIN 120
  121 REQKRWYNKT KTVLAAPQHT GGCVEMHWLC YGIKCYYFII DKRTWHKCIQ TCQNYSLSFL 180
  181 KIHDKDELKF LQDHIIRDSY WIGLSYNNNK KEWSWIDNTT LNCDLVAMIS LHKTGNCKYF 240
  241 SMTGLHDDDC GKRHLCICEK GIEKYPAPLC SVKERSQSAL

Type	Start	End	Confidence
Cytoplasmic	1	44	0.91
Transmembrane Helix	45	65	0.94
Non-Cytoplasmic	66	280	0.95