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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109462549, gi...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.84
Topology Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIPAMMSLL LVSVGLRDGV QVQSYSISQL DIFSQETPLD MAPASFDDQY AGCLADMTAA  60
   61 LPDLNHSEFQ ANKVYADGWA LANIQWQDRR AWGSLWGSLP PPPPGFRDEH GVALLAYTAN 120
  121 SPLHKEFNAA VREAGRSRAH YLHHFSFKTL HFLLTEALQL LRNHRSPGCR QVYRGVHGLR 180
  181 FRPAGPGATV RLGGFASASL KNVAAQQFGE DTFFGIWTCL GAPIRGYSFF PEEEEVLIPP 240
  241 FETFQVINTS RPAQGPARIY LRALGKRSTY NCEYIKEKKC RSGPCWLNSS APGSLSASWS 300
  301 LLLLVLFLML RALPENPGLR C

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle