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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: DPEP3_RAT
Protein type: Transmembrane
Type Confidence: 0.70
Topology Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQPTGPEGPR ALSLRPLGHR LSLLGVLLII PSLWVTCNQT TPSLSSAPTS PGASSAMTTP  60
   61 GIPNDTTTSG VTSDPRLREQ ALALMRDFPL VDGHNDLPLL LRELFQNKLQ DVNLHNFTRG 120
  121 QTSLDRLRDG LVGAQFWSAY IPCQTQDRDA VRVALEQIDL IRRMCSAYPE LELVTSADGL 180
  181 NSTQKLACLI GLEGGHSLDT SLAVLRSFYE LGVRYLTLTF TCSTPWAESA TKFRHHFYTN 240
  241 ISGLTSFGEK VVEEMNRIGM MIDLSHASDT LVKQTLEASR APVIFSHSAA RSVCDNLLNV 300
  301 PDDILQLLKK NGGIVMVTLS MGVLQCSLLA NVSTVADHFD HIRTVIGSEF IGIGGSYDGS 360
  361 GRFPQGLEDV STYPVLLEEL LRRGWGEQEL QGVLRGNLLR VFRQVEQVRE KSLGQSPVEV 420
  421 VFPERQQSST CHSHLLPQSQ DAHLKVTKLP SSQVLQRASK APPCPLLGLV AAVTSPAFTL 480
  481 WLCCSGHR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle