YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|18766344
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QLRNFLKCSE DNPLFAGIDC EVFESRFPTT MALSVLVTIE MCNALNSVSE NQSLLRMPPW  60
   61 LNPWLLGAVV MSMALHFLIL LVPPLPLIFQ VTPLSGRQWG VVLQMSLPVI LLDEALKYLS 120
  121 RHHVDGVLET FMQAWCKQPL PGPHTTRGWL PGCHFNGWEQ TEEFVFIQER WTVSGLGPEK 180
  181 KARERLGLVS AAS

Type	Start	End	Confidence
Cytoplasmic	1	60	0.86
Transmembrane Helix	61	85	0.84
Non-Cytoplasmic	86	193	0.64