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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: AOC3_RAT
Protein type: Globular with Signal Peptide
Type Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTQKTTLVLL ALAVITIFAL VCVLLAGRSG DGGRLSQPLH CPSVLPSVQP QTHPGQSQPF  60
   61 ADLSPEELTA VMSFLIKHLG PGLVDAAQAR PSDNCVFSVE LQLPAKAAAL AHLDRGGPPP 120
  121 VREALAIIFF GGQPKPNVSE LVVGPLPHPS YMRDVTVERH GGPLPYYRRP VLTREYQDIQ 180
  181 EMIFHRELPQ ASGLLHHCCF YKRQGHNLLK MTTAPRGLQS GDRATWFGIY YNLSGAGFYP 240
  241 HPIGLELLVD HKALDPALWT IQKVFYQGRY YESLTQLEDM FEAGLVNVVL VPDNGTGGSW 300
  301 SLKSSVPPGR APPLQFHPEG PRFSVQGSQV RSSLWAFSFG LGAFSGPRIF DIRFQGERVA 360
  361 YEISVQEAIA LYGGNSPASM STCYMDGSFG IGKYSTPLTR GVDCPYLATY VDWHFLLESQ 420
  421 TPKTLRDAFC VFEQNQGLPL RRHHSDFYSH YFGGVVETVL VVRSVATLLN YDYVWDMVFH 480
  481 SNGAIEVKFH ATGYITSAFF FGAGEKFGNR VAEHTLGTVH THNAHFKVDL DVAGLKNWAW 540
  541 AEDLAFVPMN VPWQPEFQMQ RLQVTRKLLE TEEEAAFPLG NATPRYLYLA SNHSNKWGHR 600
  601 RGYRIQILSF AGKPLPQESP IEKAFTWGRY HLAVTQRKEE EPSSSSIYNQ NDPWTPTVDF 660
  661 TDFISNETIA GEDLVAWVTA GFLHIPHAED IPNTVTVGNG VGFFLRPYNF FDEDPSFYSP 720
  721 DSIYFRKDQD VTDCEVNSLA CLSQTANCVP DLPAFSHGGF TYK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle