YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PEX3_RAT
Protein type:	Globular with Signal Peptide
Type Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRSMWNFLK RHKKKCIFLG TVLGGVYILG KYGQKKLREI QEREAAEYIA QARRQYHFES  60
   61 NQRTCNMTVL SMLPTLREAL MQQLNSESLT ALLKNRPSNK LEIWEDLKII SFTRSIVAVY 120
  121 STCMLVVLLR VQLNIIGGYI YLDNATVGKN GTSILAPPDV QQQYLSSIQH LLGDGLTELV 180
  181 TVIKQAVQRI LGSISLKHSL SLLDLEQKLK EIRTLVEQHR SCWNDKDASK SSLCHYMMPD 240
  241 EETPLAAQAY GLSPRDITTI KLLNETRDML ESPDFSTVLN TCLNRGFSRL LDNMAEFFRP 300
  301 TEQDLQHGNS INSLSSVSLP LAKIIPIVNG QIHSVCSETP SHFVQDLLMM EQVKDFAANV 360
  361 YEAFSTPQQL EK

Type	Start	End	Confidence
Signal Peptide	1	30	0.64
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	372	0.99