YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|18958383
Protein type:	Globular with Signal Peptide
Type Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTKIIIYIC IWATAWAIPV PQLVPLERDI VEKSADVPFL AHPGTAAQNE LHINNATNDD  60
   61 SPKGSELGRQ VHSNGGYERD RNGSESIAVG GKSSPTQPIL ANAQGNSAKE REDVETYGHD 120
  121 GIHAGGENST ANGIRGQVGI AENAEEAKES KVHGQPHQDT KTGLASDTSQ NGDATLVQEN 180
  181 EPQVAGSKNS TNHEVGTHGS GVAAQETTPQ REGEGSENQG AEVTPSIGEG AGLDNTEGSP 240
  241 SGNGIEEDED TGSGDGVGAD AGDGRESHDG TEGHEGQSSG GNNDNRGQGS VSTEDDDSKE 300
  301 QEGCPPSHPL IKVVITKPWV ENSL

Type	Start	End	Confidence
Signal Peptide	1	17	0.83
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	324	0.99