YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|19070849
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEENEYSGYW EPPRRRCCCA RRGTQLVLVG LLTTVMWAGL LALLLLWHWE TEKSLKQLGD  60
   61 AAIQNVSHVT KDLQNYQSNQ LAQKSQALQM PQNLEELQAE QKQMKSQDSQ LSQNLNELQE 120
  121 DLINVKSQNS ELSQNLNTLQ EDLVNVKSQG LNEKRAASDS LEKLQEEVAK LWIEILMSKG 180
  181 TACNVCPKDW LHFQQKCYYF GEGSKQWIQA KFTCSDLKGR LVSIHSQKEQ DFLMQHINKK 240
  241 ESWIGLQDLN MEGEFVWPDG SPVGYSNWNP GEPNNGGQGE DCVMMRGSGQ WNDAFCRSYL 300
  301 DAWVCEQLAT CDLSAPLASV TPTGPTPKNE P

Type	Start	End	Confidence
Cytoplasmic	1	23	0.97
Transmembrane Helix	24	49	0.89
Non-Cytoplasmic	50	331	0.99