YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|149032124, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLEEPRSRPP PLGLAGLLFL ALFSRALSNE ILGLKLPGEP PLTANTVCLT LSGLSKRQLG  60
   61 LCLRSPDVTA SALQGLHIAV HECQHQLRDQ RWNCSALEGG GRLPHHSAIL KRGFRESAFS 120
  121 FSMLAAGVMH AVATACSLGK LVSCGCGWKG SGEQDRLRAK LLQLQALSRG KSFPHSQPSP 180
  181 IPGSVPGPGP QDTWEWGGCN HDMDFGEKFS RDFLDSREAP RDIQARMRIH NNRVGRQVVT 240
  241 ENLKRKCKCH GTSGSCQFKT CWRAAPEFRA IGAALRERLG RAIFIDTHNR NSGVFQPRLR 300
  301 PRRLSGELVY FEKSPDFCER DPALGSPGTR GRACNKTSRL LDGCGSLCCG RGHNVLRQTR 360
  361 VERCHCRFHW CCYVLCDECK VTEWVNVCK

Type	Start	End	Confidence
Signal Peptide	1	28	0.98
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	389	0.98