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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: IPI:IPI00201060....
Protein type: Transmembrane
Type Confidence: 0.73
Topology Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNAEGRNTK KEGDLLAAQA RLKDLEALLN SKEAALSTAL SEKRTLEGEL HDLRGQVAKL  60
   61 EAALGEAKKQ LQDEMLRRVD AENRLQTLKE ELDFQKNIYS EELRETKRRH ETRLVEIDNG 120
  121 KQREFESRLA DALQELRAQH EDQVEQYKKE LEKTYSAKQS RIRIDSLSAQ LSQLQKQLAA 180
  181 KEAKLRDLED SLARERDTSR RLLAEKEREM AEMRARMQQQ LDEYQELLDI KLALDMEIHA 240
  241 YRKLLEGEEE RLRLSPSPTS QRSRGRASSH SSQSQGGGSV TKKRKLESSE SRSSFSQHAR 300
  301 TSGRVAVEEV DEEGKFVRLR NKSNEDQSMG NWQIRRQNGD DPLMTYRFPP KFTLKAGQVV 360
  361 TIWASGAGAT HSPPTDLVWK AQNTWGCGSS LRTALINATG EEVAMRKLVR SLTMVEDNDD 420
  421 EEEDGDELLH HHRSHCSSSG DPAEYNLRSR TVLCGTCGQP ADKAASGSGA QVGGSISSGS 480
  481 SASSVTVTRS FRSVGGSGGG SFGDNLVTRS YLLGNSSPRT QLPELQHHVI WDLPGRGGGR 540
  541 GHLLPLHHMP PPALFLMRAG LKPKKTIPCL WVFFFFPSIF FLREVIFYSG FILKEKHKQK 600
  601 KKCLYLNP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle