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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GBRA4_RAT
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSVQKVPAI VLCSGVSLAL LHVLCLATCL NESPGQNSKD EKLCPENFTR ILDSLLDGYD  60
   61 NRLRPGFGGP VTEVKTDIYV TSFGPVSDVE MEYTMDVFFR QTWIDKRLKY DGPIEILRLN 120
  121 NMMVTKVWTP DTFFRNGKKS VSHNMTAPNK LFRIMRNGTI LYTMRLTISA ECPMRLVDFP 180
  181 MDGHACPLKF GSYAYPKSEM IYTWTKGPEK SVEVPKESSS LVQYDLIGQT VSSETIKSIT 240
  241 GEYIVMTVYF HLRRKMGYFM IQTYIPCIMT VILSQVSFWI NKESVPARTV FGITTVLTMT 300
  301 TLSISARHSL PKVSYATAMD WFIAVCFAFV FSALIEFAAV NYFTNIQMQK AKKKISKPPP 360
  361 EVPAAPVLKE KHTETSLQNT HANLNMRKRT NALVHSESDV NSRTEVGNHS SKTTAAQESS 420
  421 ETTPKAHLAS SPNPFSRANA AETISAAARG LSSAASPSPH GTLQPAPLRS ASARPAFGAR 480
  481 LGRIKTTVNT TGVPGNVSAT PPPSAPPPSG SGTSKIDKYA RILFPVTFGA FNMVYWVVYL 540
  541 SKDTMEKSES LM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle