YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ABHD6_RAT
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLDVVNMFV IAGGTLAIPI LAFVASFLLW PSALIRIYYW YWRRTLGMQV RYVHHEDYQF  60
   61 CYSFRGRPGH KPSVLMLHGF SAHKDMWLSV VKFLPKNLHL VCVDMPGHEG TTRSSLDDLS 120
  121 IVGQVKRIHQ FVECLKLNKK PFHLIGTSMG GNVAGVYAAY YPSDVCSLSL VCPAGLQYST 180
  181 DNRFVQRLKE LEDSAATQKI PLIPSTPEEM SEMLQLCSYV RFKVPQQILQ GLVDVRIPHN 240
  241 SFYRKLFLEI VSEKSRYSLH ENMDKIKVPT QIIWGKQDQV LDVSGADILA KSITNSQVEV 300
  301 LENCGHSVVM ERPRKTAKLV VDFLASVHNP DNNKKLN

Type	Start	End	Confidence
Non-Cytoplasmic	1	14	0.70
Transmembrane Helix	15	39	0.82
Cytoplasmic	40	337	0.62