YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|157822161, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALPVPRLSI PAALALGSAA LGAAFATGLF LGKRWPPWGY RRHQRLLPPQ DNPLWQYLLS  60
   61 RSMREHPALR SLRLLTLEQP QGDSMMTCEQ AQLLANLARL IKAKKALDLG TFTGYSALAL 120
  121 ALALPEAGRV VTCEVDAEPP KLGRPLWKQA EVEQKIDLRL QPALQTLDEL LAAGEAGTFD 180
  181 IAVVDADKEN CTAYYERCLQ LLRPGGVLAV LRVLWRGEVL QPQPKNKAVE CVRNLNERIL 240
  241 RDARVYISLL PLDDGLSLAF KI

Type	Start	End	Confidence
Signal Peptide	1	26	0.96
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	262	0.99