YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109490309, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGWPWAPLTA FWALGIVGAT ALRIGAFNVQ SFGDHKASDP DCGSVIAQIL AGYDIALVQE  60
   61 VRDPDLSAVS LLMEQINSVS KHEYGFVSSK PLGRDQYKEM YLFVYRKDVV SVVSTYQYPD 120
  121 PEDAFSREPF VVKFSAPGCA AKELVLIPLH AAPNQAVAEI DALYDVYLDV IDKWNTDDML 180
  181 FLGDFNADCK YVKAHDWPSI RLRSSQVFKW LIPDSADTTV GNSDCAYDRI VVSGAHMRKS 240
  241 VKPQSASVHN FQEEFDLDQT QALAISDHFP VEVTFKPH

Type	Start	End	Confidence
Signal Peptide	1	21	0.86
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	278	0.92