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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|19424284, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARKQPHSWL NAVLFGLLLI LIHVWGQDSP ESSSIRTTHT GQVRGKLDHV RDTKAGVHTF  60
   61 LGIPFAKAPV GPLRFAPPED PEPWSGVRDG TSHPAMCLQN IDMLDEVGLT DMKMILSSIP 120
  121 MSEDCLYLNI YTPAHAHEGS NLPVMVCIHG GALVIGMASM CDGSLLAVNE DLVVVAIQYR 180
  181 LGVLGFFSTG DEHARGNWGY LDQVAALRWV QQNIAHFGGN PNRVTIFGVS AGGTSVSSHV 240
  241 ISPMSQGLFH GAIMESGVAL LPDLISETSE TVSTTVAKLS GCEATDSETL VRCLRAKSGA 300
  301 EILVINKVFK MIPAVVDGEF LPRHPKELLA SEDFRPVPSI IGVNTDEYCC TIPMVMGTAQ 360
  361 IIKELSRENL QAVLKDTAAQ MMLPPECGDL LMEEYMGNTD DPQTLQIQYA EMMGDFLFVI 420
  421 PALQVAHFQR SHAPVYFYEF QHAPSYFKNV RPPHVKADHA DEVPFVFGSF FWGIKVDFTE 480
  481 EEKLLSRRMM KYWANFARHG NPNSEGLPYW PVLDHDEQYL QLDTQPAVDR ALKARRLQFW 540
  541 TKTLPQKIQE LNGAQKNHAE L

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle