YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	LAT_RAT
Protein type:	Globular with Signal Peptide
Type Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEADALSPVE LGLLLLPFVV MLLAALCVRC RELPASYDSA STESLYPRSI LIKPPQITVP  60
   61 RTPATSYPLV TSFPPLRQPD LLPIPRSPQP LGGSHRMPSS RQNSDDANSV ASYENQEPAR 120
  121 KNVDEDEDED DYPEGYLVVL PDSSPAAVPV VSSAPVPSNP DLGDSAFSME SCEDYVNVPE 180
  181 SEESAEASLD GSREYVNVSQ DAQPVIRAEL ASVTSQEVED EEEEDVDGEE APDYENLQEL 240
  241 N

Type	Start	End	Confidence
Signal Peptide	1	30	0.87
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	241	0.96