YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	RSAD2_RAT
Protein type:	Globular with Signal Peptide
Type Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLVPTALAAR LLSLFQQQLG SLWSGLAMLF CWLRIALGWP DPGKGQPRVR GEPKETQETH  60
   61 EDPGSAQPTT PVSVNYHFTR QCNYKCGFCF HTAKTSFVLP LEEAKRGLLL LKQAGMEKIN 120
  121 FSGGEPFLQD RGEYLGKLVR FCKEELALPS VSIVSNGSLI RERWFKDYGD YLDILAISCD 180
  181 SFDEQVNVLI GRGQGKKNHV ENLQKLRKWC RDYKVAFKIN SVINRFNVDE DMNEHIKALS 240
  241 PVRWKVFQCL LIEGENSGED ALREAERFLI SNEEFEAFLQ RHKDVSCLVP ESNQKMKDSY 300
  301 LILDEYMRFL NCTGGRKDPS RSILDVGVEE AIKFSGFDEK MFLKRGGKYV WSKADLKLDW 360
  361

Type	Start	End	Confidence
Signal Peptide	1	38	0.66
N-region	1	29
H-region	30	35
C-region	36	38
Cleavage Site	38	39
Non-Cytoplasmic	39	360	0.96