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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: HECW1_MOUSE
Protein type: Globular with Signal Peptide
Type Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLHLCSVKN LYQNRFLGLA AMASPSRNSQ SRRRCKEPLR YSYNPDQFHN IDIRNGAHDA  60
   61 ITIPRSTSDT DLVTSDSRST LMVSSSYYSI GHSQDLVIHW DIKEEVDAGD WIGMYLIGEV 120
  121 SSENFLDYKN RGVNGSHRGQ IIWKIDASSY FVECETKICF KYYHGVSGAL RATTPSVTVK 180
  181 NSAAPIFKGI GSEETAQSQG SRRLISFSLS DFQAMGLKKG MFFNPDPYLK ISIQPGKHSI 240
  241 FPALPHHGQE RRSTIIGNTV NPIWQAEHFS FVSLPTDVLE IEVKDKFAKS RPIIKRFLGK 300
  301 LSMPVQRLLE RHAIGDRVVS YTLGRRLPTD HVSGQLQFRF EITSSIHADD EEISLSAEPE 360
  361 SSAETQDSIM NSMVGNSNGE PSGDATEFCK DAKPESPSEG NGVNSSENQN QEHAGPVEEA 420
  421 AGAMEARDGS NVSEAPEEPG ELQDPEQHDT QPTLSAEEVA EGLPLDEDSP SSLLPEENTA 480
  481 LGSKVEEETV PENGAREEEM QKGKDEEEEE EDVSTLEQGE PGLELRVSVR KKSRPCSLPV 540
  541 SELETVIASA CGDAETPRTH YIRIHTLLHS MPSAQRGSTT EEEDGLEEES TLKESSEKDG 600
  601 LSEVDTIAAD PQSMEDGESD GATLCMAPSD CSGGHFSSLS KGIGAGQDGE AHPSTGSESD 660
  661 SSPQQGADHS CEGCDASCCS PSCYSTSCYS SSCYSSSCYS SSCYNGNNRF ASHTRFSSVD 720
  721 SAKISESTVF SSQEDEEEEN SAFESVPDSV QSPELDPEST NGAGPWQDEL AAPGGNAARS 780
  781 TEGLESPMAG PSNRREGECP ILHNSQPISQ LPSLRPEHHH YPTIDEPLPP NWEARIDSHG 840
  841 RVFYVDHINR TTTWQRPSMA PTPDGMIRSG SVHQMEQLNR RYQNIQRTMA TERAEEDSGN 900
  901 QNSEQIPDGG GGGGGGSDSE AESSQSSLDL RREGSLSPVN SQKVTLLLQS PAVKFITNPE 960
  961 FFTVLHANYS AYRVFTSSTC LKHMILKVRR DARNFERYQH NRDLVNFINM FADTRLELPR1020
 1021 GWEIKTDHQG KSFFVDHNSR ATTFIDPRIP LQNGRLPNHL THRQHLQRLR SYSAGEASEV1080
 1081 SRNRGASLLA RPGHSLIAAI RSQHQHESLP LAYNDKIVAF LRQPNIFEML QERQPSLARN1140
 1141 HTLREKIHYI RTEGNHGLDK LSCDADLVIL LSLFEEEIMS YVPLQSAFHP GYSFSPRCSP1200
 1201 CSSPQNSPGL QRASARAPSP YRRDFEAKLR NFYRKLEAKG FGQGPGKVKL IIRRDHLLEG1260
 1261 TFNQVMAYSR KELQRNKLYI TFVGEEGLDY SGPSREFFFL LSQELFNPYY GLFEYSANDT1320
 1321 YTVQISPMSA FVENYLEWFR FSGRILGLAL IHQYLLDAFF TRPFYKGLLK LPCDLSDLEY1380
 1381 LDEEFHQSLQ WMKDNNITDI LDLTFTVNEE VFGQVTEREL KSGGANTQVT EKNKKEYIER1440
 1441 MVKWRVERGV VQQTEALLRG FYEVVDSRLV SVFDARELEL VIAGTAEIDL NDWRNNTEYR1500
 1501 GGYHDGHLVI RWFWAAVERF NNEQRLRLLQ FVTGTSSVPY EGFAALRGSN GLRRFCIEKW1560
 1561 GKITSLPRAH TCFNRLDLPP YPSYSMLYEK LLTAVEETST FGLE

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