YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|149030221, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGERWALGPA AGSSLLLCSA LLAAGCTLGL RLGRGRSAVE RWVLAWLCYD SLVHFVLEGA  60
   61 FVYLSIVGNV ADSQGLIASL WKEYGKADAR WLYFDPTIVS LEILTVVLDG FLALVLIYAI 120
  121 VKEKYYRHFV QITLCVCELY GCWMTFFPEW LVGSPNLNTN SWLYLWIYLV FFNGLWVLIP 180
  181 GLLLWQSWVE LKKRGHQEAS LARKHK

Type	Start	End	Confidence
Non-Cytoplasmic	1	7	0.90
Transmembrane Helix	8	30	0.89
Cytoplasmic	31	42	0.83
Transmembrane Helix	43	67	0.81
Non-Cytoplasmic	68	97	0.95
Transmembrane Helix	98	121	0.89
Cytoplasmic	122	128	0.86
Transmembrane Helix	129	147	0.96
Non-Cytoplasmic	148	163	0.87
Transmembrane Helix	164	186	0.92
Cytoplasmic	187	206	0.94