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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|149062378, gi...
Protein type: Transmembrane
Type Confidence: 0.84
Topology Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYRDPEAASP GAPTRDVLLV SAIITVSLSV TIVLCGLCHW CQRKLGKRYK NSLETVGTPD  60
   61 SGRGRGEKKA INDLDRDFWN NNESTVQQKW SSYPPKEFIL NISPYAPYGD PRLSLNGTLL 120
  121 SGAKVATAAA GLAVEREGRL GEKPAPVPPP GEDALRSGGA APSEPGSSGK AGRGRWRMVQ 180
  181 SHLAAGKLNL SNFEDSTLST ATTLESIPSS AGEPKCQRPR TLMRQQSLQQ PLSQNQRGRQ 240
  241 PSQPTTSQSL GQLQAHAASA PGSNPRAYGR GQARQGTSAG SKYRAAGGRS RSNPGSWDHV 300
  301 VGQIRNRGLD MKSFLEGRMV VLSLVLGLSE QDDFANIPDL QNPGTQQNQN AQGDKRLPAG 360
  361 GKAVNTAPVP GQTPHDESDR RTEPRSSVSD LVNSLTSEML MLSPGSEEDE AHEGCSRENL 420
  421 GRIQFSVGYN FQESTLTVKV MKAQELPAKD FSGTSDPFVK IYLLPDKKHK LETKVKRKNL 480
  481 NPHWNETFLF EGFPYEKVVQ RILYLQVLDY DRFSRNDPIG EVSIPLNKVD LTQMQTFWKD 540
  541 LKPCSDGSGS RGELLLSLCY NPSANSIIVN IIKARNLKAM DIGGTSDPYV KVWLMYKDKR 600
  601 VEKKKTVTKK RNLNPIFNES FAFDIPTEKL RETTIIITVM DKDKLSRNDV IGKIYLSWKS 660
  661 GPGEVKHWKD MIARPRQPVA QWHQLKA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle