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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|149062380, gi...
Protein type: Transmembrane
Type Confidence: 0.85
Topology Confidence: 0.52
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYRDPEAASP GAPTRDVLLV SAIITVSLSV TIVLCGLCHW CQRKLGKRYK NSLETVGTPD  60
   61 SGRGRGEKKA INDLDRDFWN NNESTVQQKW SSYPPKEFIL NISPYAPYGD PRLSLNFEDS 120
  121 TLSTATTLES IPSSAGEPKC QRPRTLMRQQ SLQQPLSQNQ RGRQPSQPTT SQSLGQLQAH 180
  181 AASAPGSNPR AYGRGQARQG TSAGSKYRAA GGRSRSNPGS WDHVVGQIRN RGLDMKSFLE 240
  241 GRMVVLSLVL GLSEQDDFAN IPDLQNPGTQ QNQNAQGDKR LPAGGKAVNT APVPGQTPHD 300
  301 ESDRRTEPRS SVSDLVNSLT SEMLMLSPGS EEDEAHEGCS RENLGRIQFS VGYNFQESTL 360
  361 TVKVMKAQEL PAKDFSGTSD PFVKIYLLPD KKHKLETKVK RKNLNPHWNE TFLFEGFPYE 420
  421 KVVQRILYLQ VLDYDRFSRN DPIGEVSIPL NKVDLTQMQT FWKDLKPCSD GSGSRGELLL 480
  481 SLCYNPSANS IIVNIIKARN LKAMDIGGTS DPYVKVWLMY KDKRVEKKKT VTKKRNLNPI 540
  541 FNESFAFDIP TEKLRETTII ITVMDKDKLS RNDVIGKIYL SWKSGPGEVK HWKDMIARPR 600
  601 QPVAQWHQLK A

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle