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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|149062381, gi...
Protein type: Transmembrane
Type Confidence: 0.89
Topology Confidence: 0.37
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYRDPEAASP GAPTRDVLLV SAIITVSLSV TIVLCGLCHW CQRKLGKRYK NSLETVGTPD  60
   61 SGRGRGEKKA INGTLLSGAK VATAAAGLAV EREGRLGEKP APVPPPGEDA LRSGGAAPSE 120
  121 PGSSGKAGRG RWRMVQSHLA AGKLNLSNFE DSTLSTATTL ESIPSSAGEP KCQRPRTLMR 180
  181 QQSLQQPLSQ NQRGRQPSQP TTSQSLGQLQ AHAASAPGSN PRAYGRGQAR QGTSAGSKYR 240
  241 AAGGRSRSNP GSWDHVVGQI RNRGLDMKSF LEGRMVVLSL VLGLSEQDDF ANIPDLQNPG 300
  301 TQQNQNAQGD KRLPAGGKAV NTAPVPGQTP HDESDRRTEP RSSVSDLVNS LTSEMLMLSP 360
  361 GSEEDEAHEG CSRENLGRIQ FSVGYNFQES TLTVKVMKAQ ELPAKDFSGT SDPFVKIYLL 420
  421 PDKKHKLETK VKRKNLNPHW NETFLFEGFP YEKVVQRILY LQVLDYDRFS RNDPIGEVSI 480
  481 PLNKVDLTQM QTFWKDLKPC SDGSGSRGEL LLSLCYNPSA NSIIVNIIKA RNLKAMDIGG 540
  541 TSDPYVKVWL MYKDKRVEKK KTVTKKRNLN PIFNESFAFD IPTEKLRETT IIITVMDKDK 600
  601 LSRNDVIGKI YLSWKSGPGE VKHWKDMIAR PRQPVAQWHQ LKA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle