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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: BRNP2_RAT
Protein type: Globular with Signal Peptide
Type Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRWPCSSRFR GLWPEAAPWA VLLALGVPGW VLAVSATVAA VVPEQHVSSA GQAPLDWLLT  60
   61 DRGPFHRAQE YADFMERYRQ GFTTRYRIYR EFARWKVNNL ALERKDFFSL PLPLAPEFVR 120
  121 NIRLLGRRPN LQQVTENLIK KYGTHFLLSA TLGGEESLTI FVDKRKLSRK SETLGGVPVV 180
  181 GGTGNSSAVS LETLHQLAAS YFIDRESTLR RLHHIQIATG AIKVTETRTG PLGCSNYDNL 240
  241 DSVSSVLVQS PENKVQLLGL QVLLPEHLRE RFVAAALSYI TCSSEGELVC RENDCWCKCS 300
  301 PTFPECNCPD ADIQAMEDSL LQIQDSWATH NRQFEESEEF QTLLKRLPSD RFLNSTAISQ 360
  361 YWTMDANLQH RYQQLGASLK VLLKKMHRIV RRLFNLCKRC HRQPRFRLPK ERSLSFWWNR 420
  421 IQSLLYCGES TFPGTFLEQS HSCTCPYDQS SCQGPIPCAL GEGPACAHCA SDNTTRCGSC 480
  481 NPGYVLAQGL CRPEVAESLE NFLGLETDLQ DLELKYLLQK RDSRIEVHSI FISNDMRLGS 540
  541 WFDPSWRKRM LLTLKSNKYK PGLVHVMLAL SLQICLTKNS TLEPVMAIYV NPFGGSHSES 600
  601 WFMPVNEGSF PDWERTNVDA AAQCQNWTIT LGNRWKTFFE TVHVYLRSRI KSLDDSSNET 660
  661 IYYEPLEMTD PSKNLGYMKI NTLQVFGYSL PFDPDAIRDL ILQLDYPYTQ GSQDSALLQL 720
  721 IELRDRVNQL SPPGKVRLDL FSCLLRHRLK LANNEVGRIQ SSLRAFNSKL PNPVEYETGK 780
  781 LCS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle