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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|149022116, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTWLKTVFG VTTLVALALV VICIVLRPSR VYSPEGNTGR SLTLKDILNG TFSYKTYFPN  60
   61 WISEQEYLHQ SEDDNIVFYN IETRESYIIL SNSTMKSVNA TDYGLSPDRQ FIYLESDYSK 120
  121 LWRYSYTATY YIYDLQNGEF VRGYELPRPI QYLCWSPVGS KLAYVYQNNI YLKQRPGDPP 180
  181 FQITYTGREN RIFNGIPDWV YEEEMLATKY ALWWSPDGKY LAYVEFNDSD IPIIAYSYYG 240
  241 DGQYPRTINI PYPKAGAKNP IVRVFIVDTI YPHHVGPIEV PVPEMIASSD YYFTWLTWVT 300
  301 NERVCLQWLK RVQNVSVLSI CDFREDWHAW DCPKNQEHIE ESRTGWAGGF FVSTPAFSQD 360
  361 AASYYKIFSD KDGYKHIHYI KDTVENAIQI TSGKWEAIYI FRVTQDSLFY SSNEFEGYPG 420
  421 RRNIYRISIG NSPPSKKCVT CHLRKERCQY YTASFSYKAK YYALICYGPG LPISTLHDGR 480
  481 TDQEIQVLEE NKELENALRN IQLPAVEIKK LEDGGMTFWY KMILPPQFDR SKKYPLLIQV 540
  541 YGGPCSQSVK SVFSVNWITY LASKEGIVVA LVDGRGTAFQ GDKFLHAVYR KLGVYEVEDQ 600
  601 LTAVRKFIEM GFIDEGRIAI WGWSYGGYVS SLALASGTGL FKCGIAVAPV SSWEYYASIY 660
  661 TERFMGLPTK DDNLEHYKNS TVMARAEYFR NVDYLLIHGT ADDNVHFQNS AQIAKALVNA 720
  721 QVDFQAMWYS DQNHGISSGR SQNHLYTHMT HFLKQCFSLS D

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle