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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: IPI:IPI00200238....
Protein type: Transmembrane
Type Confidence: 0.72
Topology Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TQCSRERCLS LNTSQPRSRG APAPSPDLHA CQERASPARC PPSSLCPSVR VPRPSRDPCP  60
   61 AGSTATLPAM ETPSQRRATR SGAQASSTPL SPTRITRLQE KEDLQELNDR LAVYIDRVRS 120
  121 LETENAGLRL RITESEEVVS REVSGIKAAY EAELGDARKT LDSVAKERAR LQLELSKVRE 180
  181 EFKELKANTK KEGDLLAAQA RLKDLEALLN SKEAALSTAL SEKRTLEGEL HDLRGQVAKL 240
  241 EAALGEAKKQ LQDEMLRRVD AENRLQTLKE ELDFQKNIYS EELRETKRRH ETRLVEIDNG 300
  301 KQREFESRLA DALQELRAQH EDQVEQYKKE LEKTYSAKQS RIRIDSLSAQ LSQLQKQLAA 360
  361 KEAKLRDLED SLARERDTSR RLLAEKEREM AEMRARMQQQ LDEYQELLDI KLALDMEIHA 420
  421 YRKLLEGEEE RLRLSPSPTS QRSRGRASSH SSQSQGGGSV TKKRKLESSE SRSSFSQHAR 480
  481 TSGRVAVEEV DEEGKFVRLR NKSNEDQSMG NWQIRRQNGD DPLMTYRFPP KFTLKAGQVV 540
  541 TIWASGAGAT HSPPTDLVWK AQNTWGCGSS LRTALINATG EEVAMRKLVR SLTMVEDNDD 600
  601 EEEDGDELLH HHRSHCSSSG DPAEYNLRSR TVLCGTCGQP ADKAASGSGA QVGGSISSGS 660
  661 SASSVTVTRS FRSVGGSGGG SFGDNLVTRS YLLGNSSPRT QLPELQHHVI WDLPGRGGGR 720
  721 GHLLPLHHMP PPALFLMRAG LKPKKTIPCL WVFFFFPSIF FLREVIFYSG FILKEKHKQK 780
  781 KKCLYLNP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle