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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PRLR_RAT
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.88
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSALAFVLL VLNISLLKGQ SPPGKPEIHK CRSPDKETFT CWWNPGTDGG LPTNYSLTYS  60
   61 KEGEKTTYEC PDYKTSGPNS CFFSKQYTSI WKIYIITVNA TNQMGSSSSD PLYVDVTYIV 120
  121 EPEPPRNLTL EVKQLKDKKT YLWVKWSPPT ITDVKTGWFT MEYEIRLKPE EAEEWEIHFT 180
  181 GHQTQFKVFD LYPGQKYLVQ TRCKPDHGYW SRWSQESSVE MPNDFTLKDT TVWIIVAILS 240
  241 AVICLIMVWA VALKGYSMMT CIFPPVPGPK IKGFDTHLLE KGKSEELLSA LGCQDFPPTS 300
  301 DCEDLLVEFL EVDDNEDERL MPSHSKEYPG QGVKPTHLDP DSDSGHGSYD SHSLLSEKCE 360
  361 EPQAYPPTLH IPEITEKPEN PEANIPPTVD PQSTNPNFHV DAPKSSTWPL LPGQHMPRSP 420
  421 YHSVADVCKL AGSPVNTLDS FLDKAEENVL KLSKALETGE EEVAEQKGAK SFPSDKQNTP 480
  481 WPLLQEKSPT VYVKPPDYVE IHKVNKDGVL SLFPKQRENN QTEKPGVPET SKEYAKVSGI 540
  541 TDNNILVLVP DSRAQNTALL EESAKKAPPS FEADQSEKDL ASFTATSSNR RLQLGRLDYL 600
  601 DPTCFMHSFH 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle