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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: HAVR1_RAT
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVQLQVFISG LLLLLPGSVD SYEVVKGVVG HPVTIPCTYS TRGGITTTCW GRGQCPYSSC  60
   61 QNILIWTNGY QVTYRSSGRY NIKGRISEGD VSLTIENSVD SDSGLYCCRV EIPGWFNDQK 120
  121 MTFSLEVKPE IPTSPPTRPT TTRPTTTRPT TISTRSTHVP TSTRVSTSTP TPEQTQTHKP 180
  181 EITTFYAHET TAEVTETPSY TPADWNGTVT SSEEAWNNHT VRIPLRKPQR NPTKGFYVGM 240
  241 SVAALLLLLL ASTVVVTRYI IIRKKMGSLS FVAFHVSKSR ALQNAAIVHP RAEDNIYIIE 300
  301 DRSRGAE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle