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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109479000, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPRILWSCY LCCLLTIATE AASYPPRGYS LYTGGSGALS PGGPQAQNSP RPASRHRNWC  60
   61 AYVVTRTVSC VLEDGVETFV KPDYQPCGWG QPQCPRSIMY RSFLRPRYRV AYKTVTDMEW 120
  121 RCCQGYGGDD CGEGPASVLG PAPSTPLPRP RPARPNLSGS SAGSHLSGLG GEGPGETEKV 180
  181 QQLEQQVKSL TKELQGLRGV LQGMNGRLAE DVQRAVEAAF NGRQQPADAA ARPGVHETLN 240
  241 EIQQQLQLLD NRVSTHDQEL GHLNNHHNGG PGGSGRASAP VPVPSGPSEE LLRQLERQLQ 300
  301 ESCSVCLAGL DGFRQQQQED RERLRTLEKL MSSMEERQQQ LMGPAMARRP PQECCPPELG 360
  361 RRVSELERRL DVVAGSVTVL SGRRGSELGG AAGQGGHPPG YTSLASRLSH LEDRFNSTLG 420
  421 PSEEQEKNWP GGPGRLGQWL PAAPGQLEKL EVLLANVSRE LGGRLDLLEE QVAGAVRACG 480
  481 QICSEGPGEQ DSRVSEILSA LERRVLDSEG QLRLVGSGLH KAETAGEAQQ AMLEGLQGIL 540
  541 GRLQERMDTQ EETAAELSLR LNLTAAQLSQ LEGLLQARGD EGCGACGGVQ EELGRLRDGV 600
  601 ERCSCPLLPP RGPGAGPGVG GPSRGPLDGF SVFGGGSGSA LQALQGELSE VILTFSSLND 660
  661 SLHELQTTVE GQGADLADLG ATKDSIISEI NRLQQEATEH ITEIEERFRG LEEGQAQAGQ 720
  721 CPSLEGRLGR LEGVCERLDT VAGGLQGLRE GLSRHVAGLW AAVRESNSTS LTQAALLEKL 780
  781 LGGQAGLGRR LGALNSSLLL LEDRLQQLSL KDFTGPSGKA GPPGPPGLQG PPGPAGPPGP 840
  841 PGKDGQRGAI GPPGPQGEQG VEGAPAAPVP RVAFSAALSL PRSEPGTVPF DRVLLNDGGY 900
  901 YDPETGVFTA PLAGRYLLSA VLTGHRHEKV EAVLSRSNLG VARIDSGGYE PEGLENKPVA 960
  961 ESQPSPGALG VFSLILPLQV GDTVCIDLVM GQLAHSEEPL TIFSGALLYE DTDLEQV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle