YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	IL15_RAT
Protein type:	Transmembrane
Type Confidence:	0.49
Topology Confidence:	0.41
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKILKPYMRN TSILYYLCFL LNSHFLTEAG IHVFILGCVS VGLPKTEANW IDVRYDLEKI  60
   61 ESLIQFIHID TTLYTDSDFH PSCKVTAMNC FLLELQVILH EYSNMTLNET VRNVLYLANS 120
  121 TLSSNKNVIE SGCKECEELE ERNFTEFLQS FIHIVQMFIN TS

Type	Start	End	Confidence
Cytoplasmic	1	12	0.41
Transmembrane Helix	13	30	0.44
Non-Cytoplasmic	31	162	0.92