YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|12060420, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSLGLVMEN SQVLPAFLLC STLLVIKMYA VAVITGQVRL RKKAFANPED ALKRGGLQYC  60
   61 RSDPDVERCL RAHRNDMETI YPFLFLGFVY SFLGPNPLIA WIHFLVVLTG RVVHTVAYLG 120
  121 KMNPRIRSGA YVLAQFACFS MALQILWEVA HHL

Type	Start	End	Confidence
Non-Cytoplasmic	1	12	0.82
Transmembrane Helix	13	35	0.87
Cytoplasmic	36	78	0.83
Transmembrane Helix	79	94	0.84
Non-Cytoplasmic	95	98	0.65
Transmembrane Helix	99	119	0.78
Cytoplasmic	120	128	0.70
Transmembrane Helix	129	147	0.93
Non-Cytoplasmic	148	153	0.57