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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|189442751, gi...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.85
Topology Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIATGALLRV LLLLLAFGHS TYGAECDPAC DPQHGFCEAD NVCRCEPGWE GPLCEKCVTS  60
   61 PGCVNGLCEE PWQCVCKEGW DGKFCEIDIR ACTSTPCANN GTCVDLEKGQ YECSCTPGFS 120
  121 GKDCQHKAGP CVINGSPCQH GGACVDDEGR ASHASCLCPP GFSGNFCEIV TNSCTPNPCE 180
  181 NDGVCTDIGG DFRCRCPAGF VDKTCSRPVS NCASGPCLNG GTCLQHTQVS FECLCKPPFM 240
  241 GPTCAKKRGT SPVQVTHLPS GYGLTYRLTP GVHELPVQQP EHHILKVSMK ELNKSAPLLT 300
  301 EGQAICFTIL GVLTSLVVLG TVAIVFLNKC EAWVSNLRYN HMLRKKKNLL LQYNSGEELA 360
  361 VNIIFPEKID MTTFNKEAGD EDI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle