YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|3142692
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSEPSWTAT PSPGGTLPVP NATTPWLGRD EELAKVEIGI LATVLVLATG GNLAVLLTLG  60
   61 RHGHKPSRMH LFVLHLALTD LGVALFQILP MWLSPSPCFW ATSAAAATPG STWASTVACC 120
  121 HVP

Type	Start	End	Confidence
Non-Cytoplasmic	1	37	0.71
Transmembrane Helix	38	60	0.86
Cytoplasmic	61	70	0.77
Transmembrane Helix	71	91	0.93
Non-Cytoplasmic	92	98	0.70
Transmembrane Helix	99	120	0.63
Cytoplasmic	121	123	0.53