YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|197927135, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSCSGSGADP EAAPACAASV AGPAPPVSAP AALPTSTAAE SKASPAGTAG GPGAGVATAG  60
   61 TGPVAARAGE PAERRGPASV AAGGAAPPEG AMSNGVYALP SAANGEVKPV VSSTPLVDFL 120
  121 MQLEDYTPTI PDAVTGYYLN RAGFEASDPR IIRLISLAAQ KFISDIANDA LQHCKMKGTA 180
  181 SGSSRSKSKD RKYTLTMEDL TPALSEYGIN VKKPHYFT

Type	Start	End	Confidence
Signal Peptide	1	31	0.70
N-region	1	22
H-region	23	28
C-region	29	31
Cleavage Site	31	32
Non-Cytoplasmic	32	218	0.99