YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	folt-1
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Non-Cytoplasmic	1	47	0.56
Transmembrane Helix	48	65	0.66
Cytoplasmic	66	72	0.65
Transmembrane Helix	73	91	0.91
Non-Cytoplasmic	92	98	0.66
Transmembrane Helix	99	119	0.87
Cytoplasmic	120	132	0.84
Transmembrane Helix	133	153	0.90
Non-Cytoplasmic	154	160	0.80
Transmembrane Helix	161	184	0.88
Cytoplasmic	185	243	0.98
Transmembrane Helix	244	261	0.64
Non-Cytoplasmic	262	279	0.62
Transmembrane Helix	280	301	0.77
Cytoplasmic	302	321	0.69
Transmembrane Helix	322	345	0.85
Non-Cytoplasmic	346	357	0.71
Transmembrane Helix	358	381	0.88
Cytoplasmic	382	410	0.75

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSWRTTTAIL CLYGAVKEFR PATPFLTPFL ASPEKNITLD ELYSQVYPYW TYSYMLALIP  60
   61 MFILTDILRY KPIVMIEAIG LVATWALLVF GKGVWQMQIM QVSFGVASAA EIAYYSYIYS 120
  121 IVDRKHYKRA TSYIRAAALM GKLVAFGLGQ TLISTHTSDY LVLNQISLGA VCLVTIIAIF 180
  181 LPRVKSEKAK VSMRAHEIVE QQTVESVESV QTPKAVKMSY TREYFKKISE ELQICSKNQE 240
  241 LLKWSLWWAL ASCGVYQVQN YTQSLWKELQ NNPDDVANGV VEFVNTALGA FLSLFIHHLS 300
  301 IDWTLRYVLR ANVAKELSSN NHGLIFGCNT FVAVCLQSLL TLVVVDSRFL HLDIRTQFVI 360
  361 YSGYFALVAS IFAFFFMISL FSKSSNAHTA QTTYEATNEI QEETVFLDQN