YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	RELL2_RAT
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEPQPGLEP PQHGLYMLFL LVLVFFLMGL VGFMICHVLK KKGYRCRTSR GSEPDDAQLQ  60
   61 PPEDDDVNED TVERIVRCII QNEANAEALK EMLGDSEGEG TVQLSSVDAT SSLQDGAPSH 120
  121 HHTVHLGSAA PCIHCSRSKR PPLVRQGRSK EGKGRPRPGE TTVFSVGRFR VTHIEKRYGL 180
  181 HEHRDGSPTD RSWGSGGGQE PGVSQVAGGQ PRTGTAAIER LLPEPPPSQA AATHPVQNGR 240
  241 LKDASLVPCT LEGTPGTSAE LNVGTRGTGP SPGLPSQEAN GQPTKLDTSG QQDSLPPEAG 300
  301 GM

Type	Start	End	Confidence
Non-Cytoplasmic	1	14	0.93
Transmembrane Helix	15	39	0.90
Cytoplasmic	40	302	0.95