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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: TGON3_RAT
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.98
Topology Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQFLVALLLL SVAVARALPS ASKPNNTSSE NNPPIQPSTP LPPGVDISQQ VKTNRPTDQR  60
   61 LESDKEGQDK TVARTSASVS SGVESATNLN LDDSKKHPET ADAKLKETLQ QLLPVDPKQE 120
  121 KSGQKFTKDS GSPTGGDSDN TTGGDSNKTT GVDSDKTSGG DSNKPTGSDN DKPTGGDSNK 180
  181 PTSKVPSNTE TPKIDKVQLT EKGQKPTLIS KTESGEKLAG DSDFSLKPEK GDKSSEPTED 240
  241 VETKEIEEGD TEPEEGSPLE EENEKVLGPS SSENQEGTLT DSMKDEKDDH YKDNSGNTSA 300
  301 ESSHFFAYLV TAAVLVAVLY IAYHNKRKII AFALEGKRSK VTRRPKASDY QRLNLKL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle