YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	B4GT4_RAT
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGCNPPYLLS YRLRLLLLFT LCLTVLGWAT SNYFVGAIQV IPRAKNFMAT LHKVMYLGNE  60
   61 ETLGHGAAMK KAELANCPSV SPNLRGQNKL VFKPDLTLEE VQAKNPKVSR GRYRPEECKA 120
  121 LQRVAVLIPH RNREKHLIYL LEHLHPFLQR QQLDYGIYVI HQTGSKKFNR AKLLNVGYLE 180
  181 ALKEENWDCF IFHDVDLVPE NDFNLYTCGD QPKHLVVGRN STGYRLRYSK YFGGVTALSR 240
  241 EQFFKVNGFS NNYWGWGGED DDLRLRVELH KMKISRPKPD VGKYTMIFHT RDKGNEVNGS 300
  301 RMKLLQQMSR VWKTDGLSSC SYRLLSVEHN PLYANITVDF WTAA

Type	Start	End	Confidence
Signal Peptide	1	31	0.94
N-region	1	22
H-region	23	28
C-region	29	31
Cleavage Site	31	32
Non-Cytoplasmic	32	344	0.99