YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SPCS3_RAT
Protein type:	Globular with Signal Peptide
Type Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNTLLSRANS LFAFTLSVMA ALTLGCILTT AFKDRSAPVR LHVSRILLKK VEDFTGPRKK  60
   61 SDLGFITFHI SADLEKTFDW NVKQLFLYLS AEYSTKSNAV NQVVLWDKIL LRGENPKLNL 120
  121 KDVKSKYFFF DDGHGLKGNR NVTLTLSWQV IPIAGILPLV TGSGRVSVPF PDSYEIATTF 180
  181

Type	Start	End	Confidence
Signal Peptide	1	31	0.81
N-region	1	22
H-region	23	28
C-region	29	31
Cleavage Site	31	32
Non-Cytoplasmic	32	180	0.92