YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PHLD_RAT
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVGRLWSGL LLLLLFFCSR SSSCGLSTHV EIGHRALQFL QLQDGRINYK ELLLEHQDAY  60
   61 QAGTVFPDAF YPSICKQGKF HEVSESTHWT PFLNASIHYI RENYPLPWEK DTEKLVAFLF 120
  121 GVTSHMVADV SWHSLGIEQG FLRTMGAIDF YDSYSEAHSA GDFGGDVLSQ FEFNFNYLSR 180
  181 RWYVPIQDLL RIYDNLYGRK VITKNVIVDC TYLQFLEMHG EMLAVSKLYS TYSTKSPFLV 240
  241 EQFQDYFLGG LDDMAFWSTN IYRLTSFMLE NGTSDCNLPE NPLFISCDGR KNHTLSSSKV 300
  301 QKNDFHRNLT MFISKDIRKN LNYTERGVFY STGSWAPESV TFMYQTLERN LRMMFTGNSQ 360
  361 TALKHVSSPS ASYTLSVPYA RLGWVMASAD LNQDGHGDLV VGAPGYSHPG RFQIGRVYII 420
  421 YGNDLGLPPI DLDLDKEAHG VLEGFQPSGR FGSALAVLDF NKDGLPDLAV GAPSVGSGQL 480
  481 TYNGSVYVYY GSQQGRLSSS PNITISCKDT YCNLGWALLA ADADGDGQHD LVISSPFAPG 540
  541 GGKQRGIVAA FYSHPRRNDK ESLTLDEADW KVNGEEDFSW FGYSLHGVTV ANRSLLLIGS 600
  601 PTWKNISRMA RSSHQKNQEK KSLGRVYGYF PPNRQREITI SGDKAMGKLG TSLSSGYVRV 660
  661 NGTLTQVLLV GAPTHDDVSK MAFLTMTLHH GGATRMYELA PEKTQPALFS TFSGDRRFSR 720
  721 FGSVLHLTDL DDDGLDEIIM AAPLRITDVT SGLLGEEDGR VYIYNGMHTT LGDVTGKCKS 780
  781 WMTPCPEEKA QYVLISPEAS SRFGSSLVSV RSKERNQVVV AAGRSSWGAR LSGALHVYSF 840
  841 SSD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle