YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ATPD_RAT
Protein type:	Globular with Signal Peptide
Type Confidence:	0.47
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLPAALLRHP GLRRLVLQAR TYAQAAASPA PAAGPGQMSF TFASPTQVFF DGANVRQVDV  60
   61 PTLTGAFGIL ASHVPTLQVL RPGLVMVHAE DGTTTKYFVS SGSVTVNADS SVQLLAEEVV 120
  121 TLDMLDLGAA RANLEKAQSE LSGAADEAAR AEIQIRIEAN EALVKALE

Type	Start	End	Confidence
Signal Peptide	1	32	0.46
N-region	1	23
H-region	24	29
C-region	30	32
Cleavage Site	32	33
Non-Cytoplasmic	33	168	0.88