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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|159155019, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLLAGDGSD YDYSALSCTS DTSLNAPPVH EQEALKGVYY KRAQRLPPTD PNFTDALHPD  60
   61 ASLPSCAQRL HVIINVGGLR YQFPWTTLED FPLSRLGQLR LCSTFDEIMH ICDDYDVVHN 120
  121 EFFFDRSPCA FRTILTFLRA GKLRSLREMC ALSFQEELLY WGVPEESLEW CCRRRLLQRV 180
  181 EECDELERVA EEDEEDEDDS ESGLARESRL GRCMGKLRDM VEKPHSGLPG KIFACLSVLF 240
  241 VTITAINLSI STMPAMREEE ETGKCSQMCY NIFIVETVCV AWFSLEFTLR FIQDRSKLAF 300
  301 LRRPLNLIDV IAILPYYITL VVDSTSTGEK RLGSGSSYLD KVGLVLRVLR ALRILYVMRL 360
  361 ARHSLGLQTL GLTARRCTRE FGLLLLFLCV AIALFSPLLY LIENEAAATR EFSSIPATYW 420
  421 WAVITMTTVG YGDMVPRSIP GQVVALSSIL SGILLMAFPV TSIFHTFSRS YVELKQEQQR 480
  481 LLQRRTHFLL RSRIAGLGSD LSLESDVLFP SVSSEHRNRE E

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle