YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|156230661, gi...
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAADSAVSNG GENILTDSDD DILNPNDLSE VLAAGTKESH DKAENSPFVK DFLRGRIKRE  60
   61 LFKLGTTALY YVYSAIEEEI EKVKDHAVFA PLYFPSELHR QEALAKDLAY FYGEDWESQI 120
  121 SCSAATQPYV DRIHEVGRDD PVLLVAHAWT RYMGDLSGGQ ILKKVAQRAL KLPPTGEGLN 180
  181 FYHFEGIHNP TAFKRLYRSR MNELEVDAET KAKLLDEANL AFKLNLDVFT ELQEIGKDIE 240
  241 EEVQDIGPHA HGDMGGDISK CPYYAAKMAV SGNTTYACNF AKTVLRQSTV QVILATLVAA 300
  301 VAGLAAWYLM

Type	Start	End	Confidence
Cytoplasmic	1	288	0.56
Transmembrane Helix	289	309	0.89
Non-Cytoplasmic	310	310	0.61