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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PCYOX_RAT
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRFAATLVG SLFGLGLLLC GLGRLASAEP RAPPEKIAIV GAGIGGTSSA YYLRKKFGKD  60
   61 VKIDVFEREE IGGRLATLKV QGHDYEAGGS VIHPLNLHMK RFVKELGLSS VPASGGLVGV 120
  121 YNGKSLVFEE SSWFIINVIK LVWRYGFQSL RMHMWVEDLL DKFMRIYRYQ SHDYAFSSVE 180
  181 KLMYAIGGDD YVRLLNQTLR ENLKKAGFSE TFLNEMIAPV MKVNFGQSTD LNAFVGAVSM 240
  241 TAADSNLWAV EGGNKVVCSG LLQASNSNLI SGSVMSIEKT RTKQTGTPPK MYEVVYKTGS 300
  301 EIHSDFYDIV LVAAPLNRKM SNITFRNFDP PIEEFNDPYQ QLVTTLIKGE LNSTLFSSRH 360
  361 KDQFGLSAIL VTDDSDMFIN SLSIVASVSH KEGPPPAVDG MHVWKTFSKD ILTKEQISKL 420
  421 FLSYDYAVRK PWLSYPYYNP PQKCPSIILH DRLYYLNGIE FAASCMEMSA IAGYNAALLA 480
  481 YHRWNGNEDM IDQDDLYEKL KTEL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle