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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ZP2_RAT
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.87
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARWQRVYWL RSLFFALVTS VNSLSLPQSE NPAFPGTLIC DKDEVRVEFS SRFDMEKWNP  60
   61 SLVDTFGNEI SNCTYALDLE KFILKFPYET CTIKVIGGYQ VNIRVQDTNA DVSYKDDVHH 120
  121 FFCPAIQAEI HEVSEIVVCM EDLISFSFPQ LFSRLADENQ NVSEMGWIIK IGNGTRVHTL 180
  181 PLKDAIVQGF NLLIDSQKIT LHVPANATGV AHYVQESSYL YTVQLKLLFS SPGQKITFSS 240
  241 QAICAPDLSV ACNVTHMSLT IPEFPGKLKS VGFGQRNIPE DQWHANGIDK EATNGLRLHF 300
  301 RKSLLKTKPS EKCPFYQFYF SSLELTFNFQ GDMLSTVIDP ECHCESPVSI DELCTRDGFM 360
  361 DFEVYSHQTK PALNLESLLV GNSSCQPIFK VQSLGLARFH IPLNGCGTRQ KFEGDKVIYE 420
  421 NEIHALWENP PSNIIFRNSE FRMTVRCHYI RDSMLLRAHI KSHSSPVASV KPGPLALVLQ 480
  481 TYPDISYQRP YRKNEYPLVR YLRQPIYMEV TVLNRNDPNI KLVLDDCWAT TFEDPASVPQ 540
  541 WQIIMDGCEY ELDNYRTTFH AANSSAAHSG HYQRFDVKTF AFVSESRGLS SLIYFHCSAL 600
  601 ICNQASPLCS VTCPAPLRNK REASKEGTMT VSLPGPIILL SDDSSSKGVM NPDSYEITKD 660
  661 IASKTLGAVA ALVGSAVIIG FICYLHKKRI VRFNS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle