YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ZP1_RAT
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.98
Topology Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAWGCFVVLL LLVAAPLRLG QHLHLKPGFQ YSYDCGVQGM QLLVFPRPNQ TIQFKVLDEF  60
   61 GNRFEVNNCS ICYHWVISEA QKPAVFSADY KGCHVLEKQD GRFHLRVFIQ AVLPNGRVDT 120
  121 AQDVTLICPK PDHILTPESY LAPPTTPQPF IPHTFALHPI SGHTLAGSGH TGLTTLYPET 180
  181 HPTPAPPSSE PGPVGPTVPQ SQWGTLGSWE LTELDSIGTH LLQERCQVAS GHIPCMVKGS 240
  241 SEEACQQAGC CYDNTKEMPC YYGNTVTLQC FRSGYFTLVM SQETALTHGV MLDNVHLAYA 300
  301 PNGCPPTQKT SAFVVFHVPL TLCGTAIQVV GKQLVYENQL VSNIEVQTGP QGSITRDGVF 360
  361 RLHVRCIFNA SDFLPIRASI FSPQPPAPVT RSGPLRLELR IATDKTFSSY YQGSDYPLVR 420
  421 LLQEPVYIEV RLLQRTDPGL ALMLHQCWAT PSASPFEQPQ WPILSDGCPF KGDNYRTQMV 480
  481 AADRATLPFW SHYQRFTIAT FTLLDSSSQN ALRGQVYFFC SASACHPVGS ETCSTTCDSE 540
  541 IARHRRSSGH HNSTIRALDI VSSPGAVGFE DAPKLEPSGS TRNSGSRPLL WVLQLLALTL 600
  601 VLGDGVLVGL SWAWAWA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle