YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|149039262, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDPWPWLTAA LLLLLLLVQL NRTARFYVKV GLYCVLCLSF SAAASIVCLL RHGGRTVDNM  60
   61 SIISWFVRSF KYVYGLRFEV SGQKKLEVDG PCVIISNHQS ILDMMGLMEI LPKRCVQIAK 120
  121 RELMFTGPVG LIMYLGGVYF INRQQAKTAM SLMADLGDLM VKENLKVWIY PEGTRNDNGD 180
  181 LLPFKKGAFY LAIQAQVPII PVVYSSFSSF YNVKTKLFTS GTIRVQVLDA VPTNGLTDAD 240
  241 VTKLVDTCYQ SMRATFLQIS EIPQENSTIK ESGVLPAQ

Type	Start	End	Confidence
Signal Peptide	1	24	0.87
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	278	0.91