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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|54035300, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVFRSGLLV LTTPLATLAA RLPPILTSAS HLVNHTLYVH LQPGMNLGGP AQPQPSPVQA  60
   61 TFEVLDFITH LYTGADLHRH LDVRILLTNI QTKSTLIPVL SSVQNLAHPP EVVLTDFQTL 120
  121 DGSQYNPVKQ QLERYATSCY SCSPQLSSVL LYPDYGTGEM PLELPNALLP STIRPASPVA 180
  181 RSPRQPVRGY RRGAVGGTFD RLHNAHKVLL SVACVLAQEQ LVVGVADKDL LKSKLLPELL 240
  241 QPYSERVGHL NEFLVDIKPS LTFELIPLLD PYGPAGSDPT LEFLVVSEET YRGGMAVNRF 300
  301 RLENGKEELA LYQIQLLKDQ SHKENEEEKV SSSSFRQRIL GNLLQPPNER PELPSGIYVL 360
  361 GLTGISGSGK SSVAQRLKNL GAYIIDSDHL GHRAYAPGGP AYQPVVEAFG TDILHQDGTI 420
  421 NRKVLGSRVF GNKKQLKMLT DIVWPVIAKL AREEMDVAVA KGKTLCVIDA AMLLEAGWQN 480
  481 MVHEVWTVVI PESEAVRRIV ERDGLSEAAA QSRLQNQMSG QQLVEQSHVV LCTLWESHVT 540
  541 QRQVEKAWDL LQKRLPKAHQ TRN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle