YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|27663478, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVFRRAWRH RVVLGLGGLA FCSTTLLYLA RCASEGETPS ASGAARTRAK AFLAVLVASA  60
   61 PRAVERRTAV RSTWLAQERR GGPKDVWARF AVGTSGLGAE ERRTLELEQA QHGDLLLLPA 120
  121 LRDAYENLTA KVLAMLTWLD EHVDFEFVLK ADDDSFARLD AILVELRARE PARRRRLYWG 180
  181 FFSGRGRVKP GGRWREAAWQ LCDYYLPYAL GGGYVLSADL VHYLRLSREY LRAWHSEDVS 240
  241 LGTWLAPVDV QREHDPRFDT EYKSRGCSNQ YLVTHKQSPE DMLEKQHMLL HEGRLCKHEV 300
  301 QLRLSYVYDW SAPPSQCCQR KEGIP

Type	Start	End	Confidence
Signal Peptide	1	32	0.96
N-region	1	23
H-region	24	29
C-region	30	32
Cleavage Site	32	33
Non-Cytoplasmic	33	325	0.99