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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|149058090, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAYPLPLVLC FALVVARVWG SSTPPTGTSE PPDVQTVAPT EDDVLQNEAD NQENVLSQLL  60
   61 GDYDKVKAVS EGSDCQCKCV VRPLGRDACQ RINEGASRKE DFYTVETITS GSSCKCACVA 120
  121 PPSAVNPCEG DFRLQKLREA DSRDLKLSTI IDMLEGAFYG LDLLKLHSVT TKLVGRVDKL 180
  181 EEEVSKNLTK ENEQIKEDVE EIRTELNKRG KENCSDNILG NMPDIRSALQ RDAAAAYAHP 240
  241 EYEERFLQEE TVSQQINSIE LLRTQPLAPP TVMKPRQPSQ RQVHLRGRLA SKPTVIRGIT 300
  301 YYKAKVSEEE NDIEDQHDEL FSGDSGVDLL IEDQLLRQED LLMSATRRPA TTRHAAAVST 360
  361 DASVQATALS SEPAQASASA PSLVDPASQA PDRQLLASPQ TTTVSPETMG VMPSTQVSPT 420
  421 TVAHTAIQPP PAMIPGDIFV EALHLVPMSP DTVGTDMAEE EGTARQEATS ASPILSPEEE 480
  481 DDIRNVIGRC KDTLSTITGP TTQNTYGRNE GAWMKDPLAK DDRIYVTNYY YGNTLVEFRN 540
  541 LENFKQGRWS NSYKLPYSWI GTGHVVYNGA FYYNRAFTRN IIKYDLKQRY VAAWAMLHDV 600
  601 AYEETTPWRW QGHSDVDFAV DENGLWLIYP ALDDEGFSQE VIVLSKLNAV DLSTQKETTW 660
  661 RTGLRRNFYG NCFVICGVLY AVDSYNQRNA NISYAFDTHT NTQIVPRLLF ENEYSYTTQI 720
  721 DYNPKDRLLY AWDNGHQVTY HVIFAY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle