YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109513139, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKLLLLSLA LWASCSPGNT GTALVDLSQP RVRCHASRYP VAVDCSWMPL QAPNSTRAMS  60
   61 FIATYRLGVA AQQQSQPCLQ RTPQASRCTI PHVHLFSTVP YLLNVTVVHP GGANSSLLAF 120
  121 VAERIIKPDP PEGVRLRKAG QRLQVLWHPP ASWPFPDIFS LKYRLRYRRR GASHFRQVGP 180
  181 IEATTFTLRN TQPHAKYCIQ VSAQDLTDYG KPSDWSLPGQ VERAPQKP

Type	Start	End	Confidence
Signal Peptide	1	23	0.91
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	228	0.99